openforcefield.utils.structure.generateSMIRNOFFStructure

openforcefield.utils.structure.generateSMIRNOFFStructure(oemol)[source]

Given an OpenEye molecule (oechem.OEMol), create an OpenMM System and use to generate a ParmEd structure using the SMIRNOFF forcefield parameters.

Parameters:
oemol : openeye.oechem.OEMol

OpenEye molecule

Returns:
molecule_structure : parmed.Structure

The resulting Structure